PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS74439.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family MYB_related
Protein Properties Length: 1027aa    MW: 114807 Da    PI: 9.7729
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS74439.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85.1e-084681340
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                     rW+teE  +++d  ++ G++ Wk++a  +  +R+++++
       EPS74439.1 46 RWSTEELTRFYDSYRKNGKD-WKKVAGAVR-NRSPEMI 81
                     9*****************99.*********.***9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.00274391IPR001005SANT/Myb domain
SuperFamilySSF466892.65E-84392IPR009057Homeodomain-like
CDDcd001670.001024689No hitNo description
PfamPF002497.2E-64681IPR001005SANT/Myb domain
PfamPF065845.9E-31583683IPR033471DIRP domain
SMARTSM011355.0E-51583684IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0016592Cellular Componentmediator complex
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1027 aa     Download sequence    Send to blast
MGPPRKSRNV NKRYSYINEV SPKRDEDVTK RSSSRKRKLA DMLGPRWSTE ELTRFYDSYR  60
KNGKDWKKVA GAVRNRSPEM IEALYTMNKA YLSLPHGTAS SAGLIAMMTD HYSNFVGSDS  120
DQESNDAAGS SRRSQKRARG RFSGVASKDL DEQYASHSLS VAPNYECLSL LKKKRTGTRP  180
RPVGKRTPRF PVAVSHEITK AGNYSSSNKL GLKSDNNAGD DEVAHKIAMA LTEASQRVGS  240
PQISGTPSRI AESVMSSPFR NAQRKVTVND VEGSTEADGE LKSPQKGRKH EEKKIEADFN  300
SGSHSDDIKE ECSGTEEGLG MDTVRNKFDY EADVSKIYNS LRPSQSKKAL FSNESKLQIK  360
DEENRDHVDE SAPVESSPPI RAKRKSSGIR MKGCLLSNSE VFPSKMPKNR KGAGLDDRSV  420
LEGNQNSHLF STKTRKNKKT PKSKVQKMEI NARNHVNGSP GAEAGDQRKQ PVSKNKKTLQ  480
SGSAKLMKAP ENTGDADARK EGIDAAQSPT HIHSINQVTS RNKVKSSRKT ILKKPEVLKD  540
LNFSEKISSD MGSLHETAVI LKDKLCNCLS NPLLRRFCTF EWFYSAIDYP WFAKREFDEY  600
LHHVGLGHVP RLTHVEWSFI RSSLGKPRRF SQQFLKQEKA KLNLYRDSVR KHYTELREGV  660
REGLPTDLSR PLSVGQRVVA IHPKTREIHD GNVLTVDHNK CRVQFNRNEL GVEFVTDIDC  720
MPLNPIEYMP PILGRQSAVG DTYFESSNEQ KANGRASEYE NLDNINCASA FLNPPSSLKE  780
AKTRSGLVDA YSQAKEADVR ALALLNRGLK KKEAIVMELR RMNDEILESQ ACDGDLSWKG  840
SEPFKKQYAA VLIQLSDVNE QVSSALHSLR ERNAYQGRRH PLTDQPGSHL NDIMESSRTK  900
AQSMVNAAIQ AILSLKGRDY NVEETIDFVN ERIPLDDDDS SSAKEVKNFA SSEVEAQIPR  960
ELIAKCVATL IMIQKCTERQ FPPCDVAQIL DSAVTSLQPR SSNNLPVYGE IQKCVGIIKN  1020
QILALIP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858965.10.0PREDICTED: protein ALWAYS EARLY 3
TrEMBLS8D3Y40.0S8D3Y4_9LAMI; Uncharacterized protein (Fragment)
STRINGSolyc01g067560.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33122333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.21e-171DNA binding
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]